|
Journal of Clinical Microbiology,
January 2000, p. 252-259, Vol. 38, No. 1
0095-1137/0/$04.00+0
Copyright
© 2000, American Society for
Microbiology. All rights reserved.
VP7 and VP4 Genotyping of Human Group A Rotavirus
in Buenos Aires, Argentina
M. H. Argüelles,1,2
G.
A. Villegas,3
A. Castello,1
A. Abrami,1
P. D. Ghiringhelli,1
L. Semorile,1 and
G. Glikmann1,*
Department of Science and Technology,
Universidad Nacional de Quilmes,oque Saenz Peña 180 (1876),1
and Animal Virus Center
(CEVAN),errano 669 (1414),3 Buenos Aires,
and Research Council Commission (CIC), La
Plata,2 Argentina
Received 20 July 1999/Returned for modification 27
August
1999/Accepted 14 October 1999
Specific and sensitive tests for the detection and
typing of group
A rotavirus strains are
needed for a more comprehensive knowledge of
the epidemiology of rotaviral infection. In this study
500 stool
specimens taken from 1996 to 1998 from children with
acute diarrhea in
Buenos Aires were examined. Group A rotavirus
was unequivocally
demonstrated in 62% of the samples tested by enzyme-linked
immunosorbent assay (ELISA) for detection of VP6 antigen,
polyacrylamide gel electrophoresis of double-stranded RNA,
and reverse
transcription-PCR (RT-PCR) for amplification of the VP7:G
(1,062 bp)
and VP4:P (876 bp) genes. Only five positive specimens
were found by
RT-PCR but not by ELISA. G and P typing was carried out by
nested
amplification of variable sequences of the VP7 and the VP4
genes with
six G- and five P-type-specific primers (multiplex PCR).
Results
obtained by this method showed the prevalence of the
following G and P
types: G1, 39%; G2, 43%; G4, 4%; P[8], 16%; P[4], 71%.
Unexpectedly, the G-P type combination most frequently
found was
G2P[4] (43%) rather than G1P[8] (12%), which is the most
commonly
found worldwide. Unusual strains of the type G1P[4]
accounted for
14% of the total, while mixed infections with more than one
type were
found in 10% of the samples. Detection of fecal rotavirus-specific
immunoglobulin M (IgM) and IgA antibodies in consecutive
samples of two
patients taken at daily intervals demonstrated that high
levels of IgM
and IgA antibodies were detected on day 1 after the
onset of disease
and that the samples remained positive for about
10 days, after which
virus shedding was no longer observed. Multiplex PCR offers
a sensitive
and specific alternative to determine the prevalence of
group A rotavirus
G and P types and to identify the emergence of uncommon
strains, whereas detection of fecal IgM and IgA antibodies
represents a useful supplement to virus detection for the
diagnosis of current or
recently acquired infections.
Rotaviruses
have been recognized as
the major etiologic agents of acute gastroenteritis in infants and
young children worldwide (14,
20, 35). Rotavirus
serotypes
are specified by two outer capsid proteins, VP4 and VP7,
encoded by
different genome segments (13,
32). VP7 and VP4
proteins
elicit, independently, neutralizing antibodies and specify
the virus G
(outer shell glycoprotein) and P (for protease-susceptible
protein)
serotypes, respectively. VP4, the product of gene
4, is the viral
hemagglutinin and appears to be responsible for restriction
of growth
in tissue culture and virulence in experimental animals
(50). Proteolytic cleavage of
this protein enhances rotavirus
infectivity (41). Rotavirus
serotypes have been
established on the basis of a 20-fold or higher difference
in
reciprocal neutralization titers with hyperimmune homologous
and
heterologous antisera (57-59). Because
the genes encoding
these proteins segregate independently of each other during
reassortment, a dual-serotyping system to account for the specificities
of both VP7 and VP4 has been adopted (32,
44).
On the basis of the VP7 protein, 14 different
G types have been
described so far; among these, 10 serotypes were associated with
acute
gastroenteritis in humans (31). Four of
these rotavirus serotypes
(G1 to G4) are the most common etiologic agents of childhood diarrhea
worldwide for which vaccines have been developed (36, 37). Typing of human group A rotavirus by molecular and
immunological methods has been reported (6, 15, 18, 26, 27, 40,
57). P
serotypes have been defined by Gorziglia et al.
(25) by using polyclonal
antibodies to baculovirus-expressed
VP4 protein. They showed that rotavirus
serotype P[8] with G1, G3,
and G4 specificities (prototype strains Wa, Ku, P, and
VA70) was
present in isolates from children with acute diarrhea
whereas type
P[4] combined with virulent G2 (DS-1-like
strain) and
P[6] with G1 to G4 specificities (prototype strains M37,
1076, McN13,
and STE) were isolated from asymptomatic newborns excreting
rotavirus.
These strains were classified into three genetic and three
antigenic
types, designated P1A, P1B, and P2, respectively. Since VP4
is a minor
outer protein with only 250 copies of the molecule per
viral particle,
monoclonal antibodies to this protein are rather difficult
to obtain
(5) for the average
laboratory. In addition, preparation of
the necessary reagents is laborious and time-consuming (21, 23).
To overcome these problems, the typing of rotavirus P
strains can be accomplished by identification of
genetically different
VP4 genes by reverse transcription-PCR (RT-PCR), as
previously reported
(9, 17,
33, 52, 53).
Analysis of prevalent VP7 and VP4 genes is
important for evaluating
candidate rotavirus
vaccines. The prevalence of G types in Argentine
children infected with group A rotavirus
was previously assessed with
monoclonal antibodies to types G1 to G4 by an enzyme-linked immunosorbent
assay (ELISA) (24). Many studies using
VP4 (P) genotyping methods demonstrated a worldwide
combination of one P
genotype, P[8], with G1, G3, and G4, whereas P[4] was frequently associated
with G2 (16, 17, 52).
Studies carried out in India revealed the prevalence of a
different G-P combination: genotype
P[6] frequently associated with an unusual G serotype G9
(49). Accordingly, similar studies
performed in Brazil also demonstrated the prevalence of
unusual human strains, bearing P[8] in
combination with G5, among children with acute gastroenteritis (53).
The asymptomatic nature of neonatal rotavirus infection may be
explained by the acquisition of maternal antibodies during early
life.
A recent study (48) demonstrated that
the lack of maternal
antibodies to P serotypes predisposes neonates to infections with
unusual rotavirus
strains. According to these authors it was
demonstrated that rotavirus
strains infecting newborns have unique
neutralizing antigens (P serotypes) on their outer capsids that
are
different from those found on rotavirus
strains causing gastroenteritis
in older children.
Specific markers of rotavirus
infection are rotavirus
specific
immunoglobulin A (IgA) and IgM antibodies in duodenal juice; however,
both salivary and fecal antirotavirus
antibodies can be taken as
indicators of intestinal immune responses in young children
(1, 6).
Furthermore, the
detection of such antibodies in stool
samples from both symptomatic and asymptomatic children can
be taken as
a marker of recently acquired infections since IgM and IgA
coproantibodies remain for long periods after the onset of
clinical
disease and in the absence of viral shedding.
This report describes the characterization of rotavirus strains
isolated from infants and children at three different hospitals in
Buenos Aires southern districts between 1996 and 1998 by G
and P
genotyping by RT-PCR, electropherotyping, and detection of
group A rotavirus-specific
IgM and IgA antibodies in stool samples. Individual
samples taken from children with acute diarrhea and
consecutive samples
taken from two patients monitored at daily intervals after
the onset of
disease were evaluated by these methods.
Viruses. Human rotavirus strains Wa (G1P[8]),
DS-1
(G2P[4]), P (G3P[8]), and VA 70 (G4P[8]), propagated in cultures
of MA104 cells, were used in this study. These
prototype
strains were kindly provided by J. Gomez, Viral
Gastroenteritis Unit,
Argentine Reference Center. Two animal rotavirus strains were
included
as controls, simian rotavirus
SA11 (serotype G3) and bovine
UK (serotype G6).
A total of 500 stool samples collected in three consecutive winter
seasons (April to July) from 1996 to 1998 were used in this
study; all
submitted samples were taken from children (age range:
6 months to 2 years; = 13 months)
suffering acute diarrhea of unknown
viral etiology since all patients were negative for known
enteric
bacteria and parasites. All samples were submitted to our
laboratory
for differential diagnosis of rotavirus
diarrhea. Laboratory diagnosis
of other enteric viruses was not performed for any of these
samples.
Requested patient data included age, sex, dates of disease
onset and
specimen collection, initial symptoms, duration of illness,
degree of
dehydration when observed, and diarrhea severity.
Stool suspensions of 10 to 20% were made in phosphate-buffered
saline,
pH 7.2. Samples prepared in this way were evaluated with
a commercial
ELISA kit (Pathfinder; Kallestad Diagnostics, Austin,
Tex.), by an
ELISA method specific for the VP6 rotavirus
antigen, by
electropherotyping of the double-stranded RNA (dsRNA) genome
by
polyacrylamide gel electrophoresis (PAGE), and finally by
screening for
the presence of rotavirus
copro-IgM and -IgA antibodies by capture
ELISA assays. G and P genotyping was assessed by RT-PCR
with generic
and type-specific primers for 100 randomly selected
samples. Ten of these samples were tested for
the presence of rotavirus
particles by electron microscopy (EM).
ELISA for antigen detection.
An ELISA consisting of a
double-antibody sandwich assay using goat antirotavirus
(VP6-specific)
antibodies labelled with biotin (N-hydroxysuccinimidobiotin;
H1757; Sigma Chemical Co., St.
Louis, Mo.) and avidin-conjugated horseradish peroxidase
(HRPO) (P0347; DAKO A/S, Glostrup, Denmark) as described
previously (21, 23). Briefly,
a 96-well polystyrene microtiter plate (Nunc,
Roskilde, Denmark) was coated with 50 µl of
affinity-purified
(protein G-Sepharose 4B; Pharmacia, Uppsala, Sweden) goat
antirotavirus
VP6 (0.5 µg/well) in bicarbonate buffer, pH
9.6. The plate was
incubated for 1 h at room temperature in a wet
chamber. After this
and the following steps the plates were washed three times
with
phosphate-buffered saline (0.5 M NaCl final
concentration)-Triton X-100
(0.2% [vol/vol]) (22).
Stool suspensions were diluted in
ELISA dilution buffer, i.e., 1% (wt/vol) bovine serum
albumin in
washing solution, and were added to duplicate empty wells
in 50-µl
volumes. Serial dilutions of purified bovine rotavirus and noninfected
MA104 cells were included in each plate
(50 µl/well) as
positive and negative antigen controls, respectively.
Plates were
incubated for 1 h at 37°C or overnight at 4°C. After
the
plates were washed, a 1/1,000 dilution of biotin-labelled
antirotavirus
IgG was added and the plates were incubated further for
1 h at
37°C, followed by a 30-min incubation with an appropriate
dilution of
avidin-conjugated HRPO. Substrate (o-phenylenediamine
[OPD]) was added for color development according to
standard
procedures. The optical density (OD) was measured at a
wavelength of
490 nm (ELISA reader Max Line; Molecular Devices, Sunnyvale,
Calif.).
The ELISA E value was calculated as the difference between
the OD for rotavirus
antigen and that for negative-control antigen.
ELISA cutoff values corresponding to E 0.2
were
calculated by testing 50 stool samples taken from
healthy age- and
sex-matched children without known diarrhea episodes during
the last 8 months (control group).
All samples were additionally tested with a commercial ELISA kit from
Kallestad.
ELISA for antibody detection.
Detection of rotavirus-specific
IgM and IgA antibodies in stool samples was
performed as µ and capture ELISAs,
respectively (46).
The following reagents included in the tests were obtained from DAKO
A/S: rabbit anti-human IgM (A0425) and rabbit anti-human IgA
(A0262).
Bicarbonate buffer (pH 9.6), washing buffer, and dilution
buffer were
the same as described above for the rotavirus
antigen detection assay.
(i) Rotavirus
IgM (µ capture ELISA). Microtiter test
plates (Maxisorp; Nunc) were coated with 50 µl of rabbit
anti-human
IgM (µ chain specific; IgG fraction) diluted in
bicarbonate buffer
(pH 9.6; 50 µl/well). Plates were incubated for
1 h at room
temperature in a wet chamber. After this and the following
steps the
plates were washed three times with washing solution as
described
before. Fifty microliters of stool samples serially diluted
in dilution
buffer was added to two duplicate wells (one for rotavirus antigen and
one for noninfected cell control antigen), with two wells
for each
dilution. Following a 1-h incubation at 37°C and another
wash,
50-µl volumes of rotavirus
antigen (108 50% tissue
culture infective doses/ml) and noninfected MA104 cell
control antigen were added to duplicate wells. After overnight incubation
at 4°C the plates were washed and subsequently incubated for
1 h at 37°C with 10 ng (calculated as IgG) of
biotin-labelled goat antirotavirus
IgG/well. After this step, the
plates were treated with avidin-conjugated HRPO followed by
OPD as
described before for the antigen detection assay.
ELISA cutoff values were obtained by testing stool samples from the
control group. A cutoff value was defined as three standard deviations
above the arithmetic mean E value of the negative samples from
the control group corresponding to E 0.2.
(ii) Rotavirus
IgA ( capture ELISA). The test was
performed similarly to the rotavirus
IgM antibody ELISA with the
exception that rabbit anti-human IgA was used as the
catching antibody
instead of rabbit anti-human IgM. ELISA cutoff levels were
obtained by
testing stool samples from the control group as for the IgM
assay; a
sample was considered to be negative if the E value
was 0.2.
Viral dsRNA and PAGE. Viral
RNA was extracted from fecal
suspensions by acid-phenol-chloroform and alcohol precipitation
according to methods published elsewhere (30). Duplicate
extracted dsRNA samples were diluted in 10 µl of
sterile distilled
H2O for RT-PCR and in electrophoresis sample
buffer for
PAGE analysis.
In some samples an additional purification step with CF11 cellulose was
required to remove substances inhibitory to the RT-PCR enzymes
(56).
RT-PCR. A 10-µl portion of
each dsRNA-extracted sample was
used as the template for RT to synthesize cDNA copies from both
strands. The RNA was denatured at 95°C and quickly chilled
on ice for
2 min. The reaction volume was brought to 25 µl by
adding the RT reaction mixture containing 50 mM
Tris-HCl, pH 8.3; 50 mM KCl; 10 mM
MgCl2; 10 mM dithiothreitol and 0.5 mM spermidine;
500 µM (each) dATP, dCTP, dTTP, and dGTP (Promega,
Madison, Wis.); 0.4 µM
concentrations of primers beg and end
(26) for the VP7 gene (1,062 bp)
and primers 1 and 2 (16) for
amplification of an 876-bp fragment of the VP4
gene; 7 U of avian myeloblastosis virus (M5101;
Promega); and 20 U of
RNasin RNase inhibitor (N2511; Promega). Oligonucleotide
primers were
purchased by DNAgency (Malvern, Pa.). Dimethyl sulfoxide
(DMSO; 5%
[vol/vol]) was added to the RT mixture, and cDNA synthesis
was
performed for 1 h 30 min in a water bath at 42°C.
Conditions for the PCR were as follows. The reaction volume was brought
to 10 µl by adding the PCR mixture, which contained 0.25 µM
concentrations of primers beg and end (VP7) and
1 and 2 (VP4), 1 µl of the PCR buffer
supplied with the enzyme, 0.75 U
of Taq DNA polymerase B (Promega), 1 µg of bovine serum
albumin (Sigma Chemical Co.), 100 µM concentrations of
each of the
deoxynucleoside triphosphates, and 2 µM MgCl2.
Capillary
tubes were loaded with PCR mixtures and then placed in a
thermocycler
(IT Idaho Technology). PCR consisted of 1 cycle at
92°C for 1 min; 30 cycles of 92°C for 2 s,
42°C for 10 s, and 72°C
for 30 s; and 1 cycle at 72°C for 3 min. A
10-µl aliquot of
the amplification product was electrophoresed through 1.5%
agarose
(Promega) in Tris-acetic acid-EDTA buffer (0.089 M
Tris, 0.089 M acetic
acid, 0.002 M EDTA [pH 7.5] containing 0.5 µg of
ethidium
bromide/ml) and visualized with an UV transilluminator.
Typing by multiplex PCR. PCR
products from the RT-PCR
described above were used as templates for a second amplification round
with a cocktail of specific primers which amplify variable
regions of
the VP7 gene, G types (26),
and variable regions of the VP4
gene, P types (52) (DNAgency). This
method is referred to as
multiplex PCR. The 1,062-bp (VP7) amplified products and
corresponding
876-bp (VP4) samples obtained after the first RT-PCR were
either used
directly (1 µl) or cut out and extracted from the
agarose gel as
purified DNA (1 µl) after electrophoresis. Conditions
for the
multiplex PCR were otherwise the same as those for the
RT-PCR.
ELISA for detection of rotavirus antigens and
antibodies. The
sensitivity of the ELISA performed with biotinylated antibodies for
antigen detection was tested by using serial 10-fold dilutions
of
highly purified bovine rotavirus
and a corresponding noninfected
control. The minimal amount of antigen detected by this
method was
estimated to be about 0.1 ng/ml, equivalent to 4 × 106
viral particles/ml.
A total of 500 human stool samples and 50 samples from
healthy children
were evaluated in parallel in-house ELISA and ELISA with a
commercial
kit from Kallestad (K-ELISA). Of 500 samples evaluated
by both methods,
62% of the samples from patients with acute gastroenteritis
were
positive in both assays; however, 4 samples were only
positive by the
in-house ELISA, as confirmed by a positive PAGE and RT-PCR
analysis. On
the other hand, three samples positive by the K-ELISA were
negative by
both PAGE and RT-PCR (results not shown). None
of the samples taken from healthy children showed values exceeding
the estimated ELISA cutoff OD value. These samples were
also negative
in the RT-PCR. Results obtained with the µ capture and capture ELISA for
determination of IgM and IgA antibodies in stool samples showed that
among the total antigen-positive samples 32.92% were also positive
for
IgM antibodies whereas 7.93% of the IgM-positive samples
had an
undetectable amount of virus, regardless of the detection
method
employed. Accordingly, among the antigen-positive samples
39.02%
showed detectable levels of IgA. These antibodies were
found in 20.63%
of the antigen-negative samples (Table 1).
Neither IgM and IgA antibodies nor rotavirus antigens were found
in samples taken from healthy children.
These results suggested that for diagnostic purposes,
detection of
fecal rotavirus
antibodies in diarrhea samples in the absence of virus
can be used as supplement to antigen detection.
|
TABLE 1.
Relationship between group A rotavirus antigens and antibodies in
stool samples
|
|
Rotavirus antigen assay
|
No. (%) of samples:
|
Result |
No. (%)
of samples |
Positive for rotavirus
antibody:
|
Negative
for rotavirus antibodies |
IgM |
IgA |
IgM + IgA |
|
Positive |
310 (62) |
34 (10.97) |
53 (17.07) |
68 (21.95) |
155 (50) |
Negative |
190 (38) |
6 (3.17) |
30 (15.87) |
9 (4.76) |
145 (76.19) |
|
Detection of the rotavirus genome by PAGE and
identification of rotavirus
particles by EM. An electropherotype profile (4-2-3-2)
characteristic of group A was demonstrated by PAGE in samples positive
by ELISA. A total of 257 (51.4%) of 500 tested
samples were positive
in both assays; however, about 18% of the ELISA-positive
samples were
not confirmed to be positive for the rotavirus
genome. Most of the rotavirus
strains detected by PAGE showed the long
electrophoretic pattern (Fig. 1)
with the
exception of three strains which exhibited short electropherotypes.
|
FIG.
1.
PAGE analysis of human rotavirus
dsRNA. PAGE analysis of
the dsRNA genome extracted from stool suspensions taken from children
with acute diarrhea is shown. All samples (lanes
1, 2, 3, and 6)
exhibited the typical 4-2-3-2 pattern of group A rotavirus. Lane 4, bovine
rotavirus
strain UK; lane 5, extraction procedure applied to a
pool of stool suspensions taken from healthy children. Numbers denote
positions of dsRNA segments.
|
|
A total of 10 selected samples positive in both
assays were further
analyzed by EM for the presence of rotavirus
particles. Samples were
selected according to the results obtained by PAGE and
ELISA to ensure
the presence of enough rotavirus
particles to be visualized by EM since
the sensitivities of PAGE and EM are similar (see below). A
total of
257 samples fulfilled this criterion; however, only
10 of these were
randomly selected for EM analysis. All samples showed the
typical
structure of the rotavirus
double-shelled particles. Other enteric
viruses were not found in the few analyzed samples.
Comparison ELISA, PAGE, and RT-PCR.
When the samples were
evaluated by the three methods, no significant differences between
ELISA and RT-PCR were observed; however only 82% of the
samples
positive by ELISA and RT-PCR were positive by PAGE. The
positive
results obtained by RT-PCR were not dependent on the
different dsRNA
extraction and purification methods used. Amplifications of
the whole
VP7 gene (1,062 bp) and a fragment of the VP4 gene
(856 bp) by RT-PCR
in stool samples from different patients, compared to
molecular weight
markers, are shown in Fig. 2.
Only a few
samples contained substances inhibitory to the RT reaction.
To overcome
this problem, a further purification of the dsRNA by CF11
cellulose was
included after the acid-phenol-chloroform extraction step.
After
treatment with CF11 cellulose, purified material yielded
dsRNA
templates suitable for RT-PCR amplification.
|
FIG.
2.
Amplification of the VP7 and VP4 genes by RT-PCR.
Amplification products corresponding to the VP7 (lanes
2, 3, and 4) and
VP4 genes (lanes 5, 6, and 7) in three different patient
samples are
shown. Lane 1, negative control; lane M, molecular weight markers
(100-bp ladder). The sizes of amplified bands are indicated.
|
|
To compare the sensitivities of ELISA and RT-PCR,
10-fold serial
dilutions of three pooled samples were made and tested by each
method.
It was found that all three samples remained positive by
RT-PCR when
diluted 100-fold; in contrast, this dilution was not
detected by ELISA.
With respect to the number of positive samples detected by
each test,
only five additional positives were found by RT-PCR. The
overall
sensitivity of the RT-PCR was dependent on the introduction
of 5% DMSO
and Mg2+ ions in RT reaction mixtures. The addition of DMSO
decreased the amount of dsRNA template needed for
amplification of both VP7 and VP4 genes from microgram
amounts in the absence of DMSO to
nanogram amounts when DMSO was present. On the other hand, the
presence
of this reagent in PCR mixtures impaired substantially the
sensitivity
of the assay. The estimated numbers of rotavirus particles detected
per milliliter by
each method were as follows: 106 (ELISA), 104
(RT-PCR), and 1011 (PAGE). Culture methods have generally
been regarded as the ultimate standard
for the diagnosis of viral infections, but this presupposes the
presence of viable virus particles in the samples. This is not
a
requirement for immunochemical methods such as ELISA or dsRNA
detection
methods such as PAGE and RT-PCR. Taking into account the
high level of
sensitivity extensively reported for most PCR methods, we
have
considered RT-PCR the "gold standard" against which other
tests may
be judged. To establish the diagnostic sensitivity and
specificity of PAGE,
in-house ELISA, and the commercial ELISA kit, each method was
compared
with RT-PCR, giving the following results: for in-house ELISA,
sensitivity was 98.4%, specificity was 100%, positive predictive value
was 100%, negative predictive value was 97.3%, and
correspondence estimated from these values was 99%; for the
commercial
ELISA kit, sensitivity was 97.1%, specificity was 98.3%,
positive
predictive value was 99%, negative predictive value was
95.1%, and
correspondence was 97.6%; for PAGE, sensitivity was 81.8%,
specificity was 100%, positive predictive value was 100%,
negative
predictive value was 95.1%, and correspondence was 97.6%.
Typing. G and P typing by
multiplex PCR of 100 randomly
selected samples showed the prevalence of the following G and P
serotypes: G1, 39%; G2, 43%; G4, 4%; coinfections with both
G1 and
G2, 7%; P[8], 16%; P[4], 71%; P[8] and P[4] simultaneously,
3%. No other G or P types were found in the samples
evaluated. In Fig. 3 are shown
the patterns of the amplified
G and P types obtained in agarose gels with different
clinical samples,
compared to molecular weight markers. The presence of two
different G
types with a single P type and the presence of two P types
with only
one G serotype were found in 10% of the samples tested,
suggesting
either coinfections with two rotaviruses
or the presence of nontypeable
strains (Fig. 3A, lane 1;
Fig. 3B, lanes 6 and 9). Of note,
an
additional amplification product of 100 bp was
detected in a few
patient samples when the samples were subjected to P typing
by
multiplex PCR (Fig. 3B, lanes
3, 6, and 8). The size of this band
cannot be attributed to any of the P types detected by this
method.
|
FIG. 3.
Typing of human group A rotavirus
VP7 and VP4 genes by
multiplex PCR. (A) Amplification products of the VP7 genes in stool
samples taken from eight different patients with acute diarrhea. Lanes
3 and 8, type G1; lanes 2, 4, 5, 6, and
7, type G2; lane 1, coinfection
with both G1 and G2 types. (B) Amplification products of the VP4 genes
in stool samples taken from nine different patients with acute
diarrhea. Lanes 2, 3, and 8, type P[8]; lanes
4, 5, 7, and 10, type
P[4]; lanes 6 and 9, coinfection with both P[8] and P[4]
types.
Negative controls consisted of multiplex PCR applied to the VP7 gene
(panel A, lane 9) and to the VP4 gene (panel B, lane 1) of bovine group
A rotavirus strain UK.
Lane M, molecular weight markers (100-bp ladder). Sizes of amplified
bands are indicated. |
The combinations of G and P types most frequently found
were G1 with
P[8] and G2 with P[4]; however, strains bearing the unusual combination
of G1 with P[4] were detected in 14% of the samples (Table 2). Two approaches were used for G
and P typing of samples by multiplex PCR: the second round
of
amplification was performed with either 1 µl of
purified DNA
fragments, 1,062 bp (G) and 876 bp (P), extracted
from agarose gel or
with 1 µl of the first PCR mixture. Results with
purified DNA
fragments were considerably better in terms of sensitivity
and the
clear-cut definition of resolved bands since a positive
reaction was
still seen when the dilution of purified cDNA template was
increased
twofold. The minimal amount of dsRNA needed for a positive
RT-PCR was
in the range of 20 to 80 pg of RNA template,
corresponding to 2 to 8 ng
of RNA in the original sample.
TABLE
2. VP4 (P) and VP7 (G) typing of human group A
rotavirus by multiplex PCR
|
|
G
type |
Prevalence (%) ofa:
|
P[8] |
P[4] |
P[8] + P[4] |
Nontypeable |
Total |
|
G1 |
12 |
14 |
39 |
G2 |
|
43 |
|
|
43 |
G4 |
4 |
|
|
|
4 |
G1 + G2 |
|
7b |
|
|
7 |
Nontypeable |
|
7c |
|
|
7 |
Total |
16 |
71 |
3 |
10 |
100 |
|
a
Percentage of total evaluated samples. |
b
Mixed infections included three G1P[8] plus P[4] samples and seven G1
plus G2P[4] samples. |
c
Nontypeable included 10 samples of type G1 combined with
untypeable P and 7 samples of untypeable G combined with P[4]. |
|
|
The presence of rotavirus
demonstrated by ELISA, RT-PCR, and IgM and
IgA antibodies in consecutive samples from a patient with
acute
diarrhea monitored at daily intervals indicated that antibodies
in
stools can be taken as markers of recently acquired infection
since IgA
and IgM were still present when no viral shedding (10 days
after onset)
was seen (Fig. 4).
FIG. 4.
Detection of virus and coproantibodies in consecutive samples. (A)
Consecutive samples from two patients taken at daily
intervals and tested for rotavirus
antigens ()
and rotavirus IgM
() and IgA () antibodies.
, RT-PCR-positive samples. The
arrow indicates illness onset. (B) Amplification products obtained by
RT-PCR with VP4-specific primers (876 bp) in consecutive samples.
Lane
0, disease onset; lanes 1 to 5, 1 to 5 days
after onset, respectively;
lane M, molecular weight markers (100-bp ladder). |
The presence of these antibodies
was detected after 10 days, with
elevated concentrations on day 6, and a marked decline 10 days
after
onset. The patients tested on consecutive days were 6 and
7 months old
and had no previous history of severe diarrhea.
The methods of choice for detection of rotavirus in stool samples
should have high degrees of sensitivity, specificity, and reproducibility,
which ensure consistency of performance in the laboratory.
ELISA for the detection of viral antigens is the method commonly
employed in many laboratories in combination with either electropherotype
determination by PAGE or detection of viral particles by
EM. The overall sensitivities of these methods are in the range of
108 to 109 viral particles/ml for PAGE; the
most sensitive ELISA described detects as few as 105
to
106 viral particles/ml, whereas for a positive EM reaction
108 viral particles/ml are required (2, 12, 56).
For rotavirus
infection, where levels of virus shedding are usually
very high, all of these methods are suitable for diagnostic purposes
(2, 8, 19, 28).
Nevertheless, when samples are taken in a late
phase of the infection
or when samples different from stools, such as throat swabs,
cerebrospinal fluid, and respiratory secretions, where the
amount of rotavirus
is expected to be very low, are used, more-sensitive
techniques such as RT-PCR amplification methods are
required (3, 33,
60).
Taking into account that cell culture methods for
human rotavirus stool
samples are reported to be 75% as efficient as antigen detection
methods (35), culture procedures are
not considered the gold
standard against which other tests may be judged. Recently reported
data (10, 29,
42) indicated that
the main drawbacks associated with the use of the latex
agglutination assays for diagnostic purposes are the low
sensitivity and specificity of these
assays compared to most ELISA methods. Recently reported data
indicated
that RT-PCR for direct detection of rotavirus
in stool samples may be
considered the gold standard method (47).
In the present
study, a comparison of diagnostic sensitivities and
specificities of
the in-house ELISA, commercial ELISA kit, and PAGE for
direct detection
of group A rotavirus in
stool samples, with RT-PCR as the standard
method, was made. The data presented here indicate that for
the rapid
screening of a large number of samples the in-house ELISA
method was
able to detect rotavirus
in stool samples with sensitivity (98.4%) and
specificity (100%) similar to those of RT-PCR at a
considerably lower
cost and without previous treatment of the sample. In
laboratories with
a restricted budget, handling a large number of specimens,
the ELISA
method should in the long run offer worthwhile savings
compared to
RT-PCR. ELISA was considerably more sensitive than
electropherotyping by PAGE. Nevertheless, for typing
purposes the method of choice is the
multiplex PCR since this method allows the simultaneous typing
and
identification of uncommon emergent rotavirus
strains. The use of PCR
enabled the genotyping of rotavirus-positive
specimens that could not
be typed by ELISA with type-specific monoclonal antibodies.
Furthermore, it may be necessary to use several monoclonal antibodies
directed to different epitopes of the same serotype because
of epitope
polymorphism within a serotype (7). On
the other hand,
removal of inhibitory substances present in stool samples
is
occasionally needed for a successful PCR (56).
In our
experience extraction procedures including or not including the
CF11
purification step could be used for obtaining dsRNA free of
substances
inhibitory of the RT-PCR enzymes. Nevertheless, in a very
small number
of samples further purification of extracted RNA was
necessary for the
removal of inhibitors that hampered RT reactions (3, 33, 56). Multiplex PCR
with a mixture of type-specific primers allows
the typing of the rotavirus
present in the samples with sensitivity and
accuracy. The test is rather easy to perform since all
type-specific
primers are added in one step. This design allows
simultaneous
detection of coinfections with different viruses and
identification of
new nontypeable strains by only one amplification run.
The results presented here showed the prevalence
of serotypes G2 and
G1, which are the most commonly found in other parts of the
world and
which are the types included in available vaccines.
Consistent with the findings of previous published
studies (9, 17,
26, 52, 53),
G1P[8] and G2P[4] were the G-P type combinations
frequently found among the tested samples; however, G2P[4]
showed a
greater prevalence (43%) than G1P[8] (12%). These results
showed a
different distribution of G-P combinations with respect to
the G-P
types previously found among children in the United States (17, 26, 47) or among children from New Delhi
(39, 49).
According to these reports, G1P[8] was the most commonly
found in the
United States and was distributed equally with G2P[4]
strains among
Indian children.
Unexpectedly, unusual combinations of G1P[4] were
found in 14% of
the samples. These rare combinations were usually present in
single-rotavirus
infections. Coinfections with only one G type and two
P types and two different G types with a single P type were
observed in
3 and 7% of tested samples, respectively. These results
need further
confirmation since they perhaps represent nontypeable G or
P types
coinfecting the same patient; specific primers for the
unusual
G5 type, which is, however, commonly found in
developing
countries (47, 53), were not included in the multiplex
PCR.
Another possible explanation for these results is the
presence of
coinfections with two rotavirus
strains sharing identical G or P types.
Similar findings were recently reported (47) in an extensive
survey conducted in 10 U.S. cities, where unusual
types were found in
1.4% (G1P[4]) and 0.3% (G2P[8]) of 348 rotavirus strains examined
by immunoassays and molecular methods including RT-PCR and
hybridization. Furthermore, additional amplification products
of small
size (100 bp) were seen in a few patient samples (Fig.
3B, lanes
3, 6, and 8); these products cannot be related to
any of the known P types
(52). One possible explanation for
these results is the
presence in these samples of coinfections with P[8] and a
new
recombinant strain. The epidemiological implications of
these uncommon
strains remain to be elucidated. Patient and control stool
samples were
taken from young children (6 to 24 months of age;
mean age, 13 months)
whose ages corresponded to the peak acquisition age of the
rotaviral
infection reported for most developing countries, including
the
population under study (A. Castello,
M. Argüelles, G. Villegas,
and G. Glikmann, unpublished data). Of note, no
difference in age
distribution was evident among the children suffering acute
diarrhea
caused by different genotypes. Accordingly, neither age
distribution
nor appearance of unusual genotypes was related to diarrheal
severity.
The intestinal immune response to the infecting rotavirus strain(s) was
evaluated by detection of copro-IgA and -IgM antibodies in
single and
consecutive samples from children with moderate to severe
diarrhea episodes.
Determination of IgM and IgA antibodies in
individual stool samples
from children suffering from acute diarrhea demonstrated that
high
levels of IgM were present in 32.92% of patient samples positive
for
viral antigens whereas 39.02% of patients with detectable amounts
of
virus were positive for IgA. Nevertheless, 7.93% of patients
without
detectable amounts of virus showed high levels of IgM
whereas IgA was
present in 20.63% of these samples. Furthermore, 155 of
310 antigen-positive samples did not show either IgM or IgA
antibodies.
These results suggest that detection of rotavirus-specific
IgM and IgA
in the absence of virus is probably more likely for a
recently acquired
infection and can be used as a supplement to virus
detection for
diagnostic purposes. In the present survey, determination
of copro-IgM
and -IgA antibodies was performed in order to evaluate
markers of the
intestinal immune response during acute diarrhea episodes
regardless of
their protective effect on either primary or secondary rotavirus infections.
Bishop et al. (1)
demonstrated that IgA coproconversion is a
valuable alternative method for detection of symptomatic and asymptomatic
rotavirus
infections in young children.
Consistent with these findings, it was previously
shown that
fluctuations in levels of rotavirus
IgA coproantibodies are sensitive indicators of rotavirus reinfections (6) since after an
acute episode of diarrhea a greater-than-threefold increase
of
copro-IgA was detected in stool samples from young children
taken at
weekly intervals. Studies of mice have shown that a single
inoculation of live virus in antibody-negative animals
elicited a long-lasting protective immunity and that
protection correlates with the presence of
IgA intestinal antibodies but that high levels of serum neutralizing
antibodies of the IgG type were not related to
protection
(12). Protection against
diarrhea after adoptive transfer of
CD8 spleen cells from immunized mice into syngeneic pups
before rotavirus inoculation
was reported previously (43). The
importance of IgA intestinal antibodies and cellular
immunity markers
such as CD8 lymphocytes in protection against rotavirus disease was
confirmed by other groups (4,
44, 54, 55).
Protection
against rotavirus disease
has been correlated with titers of serum
(45, 51)
or stool (5, 39) rotavirus
antibodies
following natural infection of young children. Furthermore,
detection
of IgM and IgA coproantibodies to confirm recently acquired
infections with other enteric viruses such as hepatitis A
virus
(38) or animal coronaviruses (11) has been
reported. A recent study (1) of serum,
fecal, and breast
milk rotavirus
antibodies determined in 68 mother-infant pairs
demonstrated that IgA coproconversion was the most sensitive method
for
detection of symptomatic and asymptomatic rotavirus
infection in
children, compared to the direct detection of the virus in
stools. The
same study clearly demonstrated that after a primary rotavirus
infection with rotavirus
serotype G2P[4], followed by a reinfection
with a rotavirus of a
different serotype, G4P[8], 12 months later, a
large increase in copro-IgA antibodies in the stool samples
occurred at
the onset of each infection; however, copro-IgA antibodies
did not
persist for >2 weeks after primary infection, whereas
coproantibody
increases persisted for >10 weeks after reinfection,
resulting in a
long-lasting copro-IgA response (IgA plateau). Accordingly,
the results
of the present study for consecutive samples from two
children suggest
a primary infection with the rotavirus
serotype G4P[8] since both IgM
and IgA antibodies were detected in high levels 6 to
7 days after onset, with a marked decline after
10 days when rotavirus
shedding was
no longer demonstrated by ELISA or RT-PCR and with complete recovery
of
clinical symptoms. Furthermore, since both children were
only 6 to 7 month old and therefore probably lacked protection
by maternal
antibodies, it can be assumed that they probably suffered from
a
primary infection with the G4P[8] genotype detected by multiplex
PCR.
In conclusion, the present study has shown that
for diagnosis of a
large number of samples, the use of a double-antibody sandwich ELISA
with biotinylated antibodies provides a rapid, sensitive, and
inexpensive procedure for the direct detection of rotavirus
antigens in
clinical specimens, with performance equal to that of
RT-PCR.
Typing of rotavirus
strains is a main application of PCR, since this
method represents a very convenient alternative when type-specific
monoclonal antibodies are not available (6,
24). An
additional advantage of this method is the potential for identification
of new reassortant or recombinant strains that
are unable to be typed
with primers directed to the known human genotypes.
Furthermore, detection of specific IgM and IgA
antibodies represents a
useful supplement to rotavirus
detection methods in the diagnosis of
current or recently acquired infections.
Clinical samples were kindly provided by Ana Borsa
from Children
Hospital Sor María Ludovica, La Plata, and by Luciana Irczick from
Hospital Materno Infantil de San Francisco Solano, Solano.
Marcelo H. Argüelles is a research fellow of
the Comisión
de Investigaciones Científicas (grant number 2482).
*
Corresponding author. Mailing address: Virology Lab,
Department of Science and Technology, Universidad Nacional de Quilmes,
Roque Saenz Peña 180 (1876), Buenos Aires,
Argentina. Phone: 54-11-4365-7100, ext. 123. Fax:
54-11-4365-7132. E-mail: gglikman@unq.edu.ar.
1. |
Bishop, R. F.,
H. C. Bugg,
P. J. Mazendycz,
J. S. Lund,
R. J. Gorell, and G. L. Barnes.
1996.
Serum, fecal and breast milk rotavirus
antibodies as indices of infection in mother-infant pairs.
J. Infect. Dis. 174(Suppl. 1):S22-S29[Medline].
|
2. |
Brandt, C. D.,
H. W. Kim,
W. J. Rodriguez,
L. Thomas,
R.-H. Yolken,
J. O. Arrobio,
A. Z. Kappikian,
R. H. Parrot, and R. M. Chanock.
1981.
Comparison of direct electron microscopy, immune electron microscopy,
and rotavirus
enzyme-linked immunosorbent assay for detection of gastroenteritis
viruses in children.
J. Clin. Microbiol. 13:976-981[Medline].
|
3. |
Buessa, J.,
J. Colomina,
J. Raga,
A. Villanueva, and J. Prat.
1996.
Evaluation of reverse transcription and polymerase chain reaction
(RT/PCR) for the detection of rotaviruses:
application of the assay.
Res. Virol. 147:353-361[Medline].
|
4. |
Burns, W. B.,
M. Siadath-Pajouh,
A. A. Krishnaney, and H. B. Greenberg.
1996.
Novel protective effect of rotavirus
VP6 specific IgA monoclonal antibodies that lack conventional
neutralizing activity.
Science 272:104-107[Abstract].
|
5. |
Coulson, B.
1993.
Typing of human rotavirus
VP4 by an enzyme immunoassay using monoclonal antibodies.
J. Clin. Microbiol. 31:1-8[Abstract].
|
6. |
Coulson, B. S.,
K. Grimwood,
I. L. Hudson,
G. L. Barnes, and R. F. Bishop.
1992.
Role of coproantibody in clinical protection of children during
reinfection with rotavirus.
J. Clin. Microbiol. 30:1678-1684[Abstract].
|
7. |
Coulson, B. S., and C.
Kirkwood.
1991.
Relation of VP7 amino acid sequence to monoclonal antibody
neutralization of rotavirus
and rotavirus monotype.
J. Virol. 65:5968-5974[Medline].
|
8. |
Cukor, G., and N. R.
Blacklow.
1984.
Human viral gastroenteritis.
Microbiol. Rev. 48:157-179[Medline].
|
9. |
Das, B. K.,
J. R. Gentsch,
E. G. Cicirello,
P. A. Woods,
A. Gupta,
M. Ramachandran,
R. Kumar,
M. K. Bhan, and R. I. Glass.
1994.
Characterization of rotavirus
strains from newborns in New Delhi, India.
J. Clin. Microbiol. 32:1820-1822[Abstract].
|
10. |
de Beer, M.,
I. Peenze,
V. M. da Costa Mendez, and A. D. Steele.
1997.
Comparison of electron microscopy, enzyme linked immunosorbent assay
and latex agglutination for the detection of bovine rotavirus in faeces.
J. S. Afr. Vet. Assoc. 68:93-96[Medline].
|
11. |
El-Kanawati, Z. R.,
H. Tsunemitsu,
D. R. Smith, and L. J. Saif.1996.
Infection and cross-protection studies of winter dysentery and calf
diarrhea bovine coronavirus strains in colostrum-deprived and
gnotobiotic calves.
Am. J. Vet. Res. 57:48-53[Medline].
|
12. |
Estes, M. K.
1996.
Advances in molecular biology: impact on rotavirus
vaccine development.
J. Infect. Dis. 174(Suppl. 1):S37-S46[Medline].
|
13. |
Estes, M. K., and J.
Cohen.
1989. Rotavirus
gene structure and function.
Microbiol. Rev. 53:410-419[Medline].
|
14. |
Estes, M. K.
1996. Rotavirus
and their replication, p. 1625-1655. In
B. N. Fields, D. M. Knipe, and P. M. Howley (ed.), Fields virology, 3rd
ed. Lippincott-Raven Publishers, Philadelphia, Pa. |
15. |
Flores, J.,
J. Sears,
I. Perez-Schael,
L. White,
D. García,
C. Lanata, and A. Z. Kapikian.
1990.
Identification of human rotavirus
serotype by hybridization to polymerase chain reaction-generated probes
derived from a hyperdivergent region of the gene encoding outer capsid
protein VP7.
J. Virol. 64:4021-4024[Medline].
|
16. |
Gentsch, J. R.,
R. I. Glass,
P. A. Woods,
V. Gouvea,
M. Gorziglia,
J. Flores,
B. K. Das, and M. K. Bahn.
1992.
Identification of group A rotavirus
gene 4 by polymerase chain reaction.
J. Clin. Microbiol. 30:1365-1373[Abstract].
|
17. |
Gentsch, J. R.,
P. A. Woods,
M. Ramachandran,
B. K. Das,
J. P. Leite,
A. Alfieri,
R. Kumar,
M. K. Bahn, and R. I. Glass.
1996.
Review of G and P typing results from a global collection of rotavirus strains:
implications for vaccine development.
J. Infect. Dis. 174(Suppl. 1):S30-S36[Medline].
|
18. |
Gerna, G.,
A. Sarasini,
S. Arista,
A. Di Mateo,
L. Giovanelli,
M. Perea, and P. Halonen.
1990.
Prevalence of human rotavirus
serotypes in some European countries.
Scand. J. Infect. Dis. 22:5-10[Medline].
|
19. |
Gilchrist, M.
J. R.,
T. S. Bretl,
K. Moultney,
D. R. Knowlton, and R. L. Ward.
1987.
Comparison of seven kits for detection of rotavirus
in fecal specimens with a sensitive, specific enzyme immunoassay.
Diagn. Microbiol. Infect. Dis. 8:221-228[Medline].
|
20. |
Glass, R. I.,
P. E. Kilgore,
R. C. Holman,
J. Shaoxiong,
J. C. Smith,
P. A. Woods,
M. J. Clarke,
M. S. Ho, and J. R. Gentsch.
1996.
The epidemiology of rotavirus
diarrhea in the United States: surveillance and estimates of disease
burden.
J. Infect. Dis. 174(Suppl. 1):S5-S11[Medline].
|
21. |
Glikmann, G.,
C. H. Mordhorst, and C. Koch.
1995.
Monoclonal antibodies for rapid diagnosis of influenza-A virus
infections.
Clin. Diagn. Virol. 3:361-369. |
22. |
Glikmann, G., and C.
H. Mordhorst.
1987.
Secretory and serum immunoglobulin class-specific antibodies to mumps
virus after a natural mumps infection.
Serodiagn. Immunother. 1:275-285. |
23. |
Glikmann, G.,
S. Chen,
C. H. Mordhorst, and C. Koch.
1995.
Monoclonal antibodies for rapid diagnostic of influenza-B virus in
samples of patients with unknown respiratory infection.
Clin. Diagn. Virol. 4:27-42. |
24. |
Gomez, J.,
M. K. Estes,
D. Matson,
R. Bellinzoni,
A. Alvarez, and S. Grinstein.
1990.
Serotyping of human rotavirus
in Argentina by ELISA with monoclonal antibodies.
Arch. Virol. 112:249-259[Medline].
|
25. |
Gorziglia, M.,
G. Larralde,
A. Z. Kapikian, and R. M. Chanock.
1990.
Antigenic relationship among human rotaviruses
as determined by outer capsid protein VP4.
Proc. Natl. Acad. Sci. USA 87:7155-7159[Medline].
|
26. |
Gouvea, V.,
R. I. Glass,
P. A. Woods,
K. Taniguchi,
H. F. Clark,
B. Forrester, and Z. Y. Fang.
1990.
Polymerase chain reaction amplification and typing of rotavirus nucleic acid from
stool specimens.
J. Clin. Microbiol. 28:276-282[Medline].
|
27. |
Green, K. Y.,
Y. Hoshino, and N. Ikegami.
1989.
Sequence analysis of the gene encoding the serotype specific
glycoprotein (VP7) of two new human rotavirus
serotypes.
Virology 168:429-433[Medline].
|
28. |
Hammond, G. W.,
G. S. Ahluwalia,
F. G. Barker,
G. Horsman, and P. R. Hazelton.1982.
Comparison of direct and indirect enzyme immunoassays with direct
ultracentrifugation before electron microscopy for detection of rotaviruses.
J. Clin. Microbiol. 16:53-59[Medline].
|
29. |
Hendricks, M. K.,
L. E. Cuevas, and C. A. Hart.
1995. Rotavirus
diarrhea in Thai infants and children.
Ann. Trop. Paediatr. 15:147-152[Medline].
|
30. |
Herring, A. J.,
N. F. Inglis,
C. K. Ojeh,
D. R. Snodgrass, and J. D. Menzies.
1982.
Rapid diagnosis of rotaviral infection by direct detection of viral
nucleic acid in silver-stained polyacrylamide gels.
J. Clin. Microbiol. 16:473-477[Medline].
|
31. |
Hoshino, Y., and A. Z.
Kapikian.
1994. Rotavirus
antigens.
Curr. Top. Microbiol. Immunol. 185:179-227[Medline].
|
32. |
Hoshino, Y.,
L. J. Saif,
M. M. Sereno,
K. Midthun,
J. Flores,
A. Z. Kapikian, and R. M. Chanock.
1985.
Independent segregation of two antigenic specificities (VP3 and VP7)
involved in neutralization of rotavirus
infectivity.
Proc. Natl. Acad. Sci. USA 82:8701-8704[Medline].
|
33. |
Hussain, M.,
P. Seth, and S. Broor.
1995.
Detection of group A rotavirus
by reverse transcriptase and polymerase chain reaction in faeces from
children with acute gastroenteritis.
Arch. Virol. 140:1225-1233[Medline].
|
34. |
Hussain, M.,
P. Seth,
L. Dar, and S. Broor.
1996.
Classification of rotavirus
into G and P types with specimens from children with acute diarrhea in
New Delhi, India.
J. Clin. Microbiol. 34:1592-1594[Abstract].
|
35. |
Kapikian, A. Z., and
R. M. Chanock.
1996. Rotaviruses,
p. 1657-1708. In
B. N. Fields, D. M. Knipe, and P. M. Howley (ed.), Fields virology, 3rd
ed. Lippincott-Raven Publishers, Philadelphia, Pa. |
36. |
Kapikian, A. Z.,
Y. Hoshino,
R. M. Chanock, and I. Perez-Schael.
1996.
Efficacy of a quadrivalent rhesus rotavirus-based
human rotavirus vaccine
aimed at preventing severe rotavirus
diarrhea in infants and young adults.
J. Infect. Dis. 174(Suppl. 1):S65-S72[Medline].
|
37. |
Kapikian, A. Z.,
J. Flores,
T. Vesikari,
T. Ruuska,
H. P. Madore,
K. I. Green,
M. Gorziglia,
Y. Hoshino,
R. M. Chanock,
K. Midthun, and I. Perez-Schael.
1991.
Recent advances in development of a rotavirus
vaccine for prevention of severe diarrheal illness of infants and young
children, p. 255-264. In
J. Mestecky, C. Blair, and P. L. Ogra (ed.), Immunology of milk and the
neonate. Plenum Press, New York, N.Y. |
38. |
Locarnini, S. A.,
A. G. Coulepis,
J. Kaldor, and I. D. Gust.
1980.
Coproantibodies in hepatitis A: detection by enzyme-linked
immunosorbent assay and immune electron microscopy.
J. Clin. Microbiol. 11:710-716[Medline].
|
39. |
Matson, D. O.,
M. L. O'Ryan,
I. Herrera,
L. K. Pickering, and M. K. Estes.
1993.
Faecal antibody responses to symptomatic and asymptomatic rotavirus infections.
J. Infect. Dis. 167:577-583[Medline].
|
40. |
Matson, D. O.,
M. K. Estes,
J. W. Burns,
H. B. Greenberg,
K. Taniguchi, and Y. Urasawa.
1990.
Serotype variation of human group A rotaviruses
in two regions of the USA.
J. Infect. Dis. 162:605-614[Medline].
|
41. |
Mattion, N. M.,
J. Cohen, and M. K. Estes.
1994.
The rotavirus proteins,
p. 169-250. In
A. Z. Kapikian (ed.), Viral infections of the gastrointestinal tract.
Marcel Dekker Inc., New York, N.Y. |
42. |
Nakata, S.,
N. Adachi,
S. Ukae,
K. Kagawa,
K. Numata,
S. Urasawa, and S. Chiba.
1996.
Outbreaks of nosocomial rotavirus
gastroenteritis in a pediatric ward.
Eur. J. Pediatr. 155:954-958[Medline].
|
43. |
Offit, P. A., and K.
I. Dudzik.
1990. Rotavirus-specific
cytotoxic T lymphocytes passively protect against gastroenteritis in
suckling mice.
J. Virol. 64:6325-6328[Medline].
|
44. |
Offit, P. A.,
H. F. Clark,
G. Blavat, and H. B. Greenberg.
1986.
Reassortant rotaviruses
containing structural proteins VP3 and VP7 from different parents
induce antibodies protective against each parental serotype.
J. Virol. 60:491-496[Medline].
|
45. |
O'Ryan, M. L.,
M. D. Matson,
M. K. Estes, and I. K. Pickering.
1994.
Anti-rotavirus G type
specific and isotype specific antibodies in children with natural rotavirus infections.
J. Infect. Dis. 169:504-511[Medline].
|
46. |
Panum, I.,
E. Thisthed,
G. Glikmann,
N. Obel,
M. Kofoed,
N. H. Sambo,
E. Valerius, and C. H. Mordhorst.1997.
Respiratory syncytial virus: detection of secretory specific IgM and
IgA antibodies by ELISA in nasopharyngeal aspirates from children with
acute respiratory disease, a useful supplement to antigen detection.
Clin. Diagn. Virol. 8:219-226[Medline].
|
47. |
Ramachandran, M.,
J. R. Gentsch,
V. D. Parashar,
S. Jin,
P. A. Woods,
J. L. Holmes,
C. D. Kirkwood,
R. F. Bishop,
H. B. Greenberg,
S. Urasawa,
G. Gerna,
B. S. Coulson,
K. Taniguchi,
J. S. Breese,
R. I. Glass, and The National Rotavirus
Strain Surveillance System Collaborating Laboratories.
1998.
Detection and characterization of novel rotavirus
strains in the United States.
J. Clin. Microbiol. 36:3223-3229[Abstract/Full Text].
|
48. |
Ramachandran, M.,
A. Vij,
R. Kumar,
B. K. Das,
J. R. Gentsch,
M. K. Bahn, and R. I. Glass.
1998.
Lack of maternal antibodies to P serotypes may predispose neonates to
infections with unusual rotavirus
strains.
Clin. Diagn. Lab. Immunol. 5:527-530[Abstract/Full Text].
|
49. |
Ramachandran, M.,
B. K. Das,
A. Vij,
R. Kumar,
N. Bhambal,
N. Kesari,
H. Rawat,
L. Bahl,
S. Thakur,
P. A. Woods,
R. I. Glass,
M. K. Bahn, and R. I. Glass.
1996.
Unusual diversity of human rotavirus
G and P genotypes in India.
J. Clin. Microbiol. 34:436-439[Abstract].
|
50. |
Ruggeri, F. M., and H.
B. Greenberg.
1991.
Antibodies to the trypsin cleavage peptide VP8* neutralize rotavirus by inhibiting
binding of virions to target cells in culture.
J. Virol. 65:2211-2219[Medline].
|
51. |
Ryder, R. W.,
N. Singh,
W. C. Reeves,
A. Z. Kapikian,
H. B. Greenberg, and R. B. Sack.
1985.
Evidence of immunity induced by naturally acquired rotavirus and Norwalk virus
infections on two remote Panamanian islands.
J. Infect. Dis. 151:99-105[Medline].
|
52. |
Santos, N.,
M. Riepenhoff-Talty,
H. F. Clark,
P. Offit, and V. Gouvea.
1994.
VP4 genotyping of human rotavirus
in the United States.
J. Clin. Microbiol. 32:205-208>[Abstract].
|
53. |
Timenetsky, M.
D. S. T.,
N. Santos, and V. Gouvea.
1994.
Survey of rotavirus G
and P types associated with human gastroenteritis in São Paulo, Brazil.
J. Clin. Microbiol. 32:2622-2624
[Abstract]. |
54. |
Ward, R. L., and D. I.
Bernstein.
1995.
Lack of correlation between serum antibody titers and protection
following vaccination with reassortant RRV vaccines.
U.S. Rotavirus Vaccine
Efficacy Group. Vaccine 13:1226-1232. |
55. |
Ward, R. L.
1996.
Mechanisms of protection against rotavirus
in humans and mice.
J. Infect. Dis. 174(Suppl. 1):S51-S58[Medline].
|
56. |
Wilde, J.,
J. Eiden, and R. Yolken.
1990.
Removal of inhibitory substances from human fecal specimens for
detection of group A rotaviruses
by reverse transcriptase and polymerase chain reactions.
J. Clin. Microbiol. 28:1300-1307[Medline].
|
57. |
Woods, P. A.,
J. Gentsch,
V. Gouvea,
L. Mata,
A. Simhon,
M. Santosham,
Z. S. Bai,
Y. Urasawa, and R. I. Glass.
1992.
Distribution of serotypes of human rotavirus
in different populations.
J. Clin. Microbiol. 30:781-785[Abstract].
|
58. |
Wyatt, R. G.,
H. D. James, Jr., and A. L. Pittmann.
1983.
Direct isolation in cell culture of human rotaviruses
and their characterization into four serotypes.
J. Clin. Microbiol. 18:310-317[Medline].
|
59. |
Wyatt, R. G.,
A. Z. Kapikian, and C. A. Mebus.
1983.
Induction of cross-reactive serum neutralizing antibodies to human rotavirus in calves after in
utero administration of bovine rotavirus.
J. Clin. Microbiol. 18:505-508[Medline].
|
60. |
Xu, L.,
D. Harbour, and M. A. McCrae.
1990.
The application of polymerase chain reaction to the detection of rotavirus in faeces.
J. Virol. Methods 27:29-38[Medline].
|
Journal of Clinical
Microbiology, January 2000, p. 252-259, Vol. 38, No. 1
0095-1137/0/$04.00+0
Copyright
© 2000, American Society for
Microbiology. All rights
reserved.
|
|